Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAF3IP2O43734 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TRAF3IP2O43734 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAF3IP2O43734 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAF3IP2O43734 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.6■■□□□ 1.05
TRAF3IP2O43734 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.6■■□□□ 1.05
TRAF3IP2O43734 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.6■■□□□ 1.05
TRAF3IP2O43734 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.6■■□□□ 1.05
TRAF3IP2O43734 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAF3IP2O43734 RNF126P1-201ENST00000567452 1320 ntBASIC21.59■■□□□ 1.05
TRAF3IP2O43734 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRAF3IP2O43734 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
TRAF3IP2O43734 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAF3IP2O43734 AC007029.1-201ENST00000604183 313 ntBASIC21.59■■□□□ 1.05
TRAF3IP2O43734 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAF3IP2O43734 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAF3IP2O43734 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAF3IP2O43734 AC010501.1-201ENST00000606270 1962 ntBASIC21.58■■□□□ 1.05
TRAF3IP2O43734 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TRAF3IP2O43734 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRAF3IP2O43734 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAF3IP2O43734 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRAF3IP2O43734 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.57■■□□□ 1.04
TRAF3IP2O43734 RP9P-202ENST00000450133 1212 ntBASIC21.57■■□□□ 1.04
TRAF3IP2O43734 HSD17B1P1-201ENST00000590052 955 ntBASIC21.57■■□□□ 1.04
TRAF3IP2O43734 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAF3IP2O43734 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAF3IP2O43734 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TRAF3IP2O43734 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAF3IP2O43734 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TRAF3IP2O43734 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAF3IP2O43734 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRAF3IP2O43734 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
TRAF3IP2O43734 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.56■■□□□ 1.04
TRAF3IP2O43734 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAF3IP2O43734 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
TRAF3IP2O43734 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAF3IP2O43734 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAF3IP2O43734 AC093536.1-201ENST00000569153 554 ntBASIC21.55■■□□□ 1.04
TRAF3IP2O43734 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRAF3IP2O43734 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRAF3IP2O43734 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRAF3IP2O43734 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAF3IP2O43734 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP2O43734 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP2O43734 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.54■■□□□ 1.04
TRAF3IP2O43734 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP2O43734 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRAF3IP2O43734 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAF3IP2O43734 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRAF3IP2O43734 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.54■■□□□ 1.04
TRAF3IP2O43734 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAF3IP2O43734 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP2O43734 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAF3IP2O43734 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP2O43734 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP2O43734 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAF3IP2O43734 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAF3IP2O43734 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TRAF3IP2O43734 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAF3IP2O43734 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRAF3IP2O43734 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRAF3IP2O43734 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.51■■□□□ 1.03
TRAF3IP2O43734 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAF3IP2O43734 AC096887.2-201ENST00000623443 1957 ntBASIC21.5■■□□□ 1.03
TRAF3IP2O43734 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP2O43734 RARRES2P2-201ENST00000394842 485 ntBASIC21.5■■□□□ 1.03
TRAF3IP2O43734 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP2O43734 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.5■■□□□ 1.03
TRAF3IP2O43734 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRAF3IP2O43734 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAF3IP2O43734 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP2O43734 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP2O43734 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAF3IP2O43734 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP2O43734 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 RAP2CP1-202ENST00000605179 643 ntBASIC21.48■■□□□ 1.03
TRAF3IP2O43734 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
TRAF3IP2O43734 AC026202.3-201ENST00000600805 1127 ntBASIC21.47■■□□□ 1.03
TRAF3IP2O43734 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP2O43734 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAF3IP2O43734 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP2O43734 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAF3IP2O43734 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAF3IP2O43734 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAF3IP2O43734 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAF3IP2O43734 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TRAF3IP2O43734 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAF3IP2O43734 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRAF3IP2O43734 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms