Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.96■□□□□ 0.79
TNFSF12O43508 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
TNFSF12O43508 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF12O43508 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
TNFSF12O43508 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF12O43508 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF12O43508 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF12O43508 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TNFSF12O43508 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TNFSF12O43508 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF12O43508 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF12O43508 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF12O43508 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF12O43508 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.94■□□□□ 0.78
TNFSF12O43508 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
TNFSF12O43508 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF12O43508 LINC01971-201ENST00000617888 1048 ntBASIC19.94■□□□□ 0.78
TNFSF12O43508 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TNFSF12O43508 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF12O43508 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF12O43508 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF12O43508 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF12O43508 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF12O43508 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF12O43508 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF12O43508 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF12O43508 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TNFSF12O43508 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TNFSF12O43508 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF12O43508 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF12O43508 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF12O43508 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF12O43508 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF12O43508 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
TNFSF12O43508 MIR219A2-201ENST00000608502 1504 ntBASIC19.92■□□□□ 0.78
TNFSF12O43508 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF12O43508 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF12O43508 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.91■□□□□ 0.78
TNFSF12O43508 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF12O43508 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF12O43508 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF12O43508 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.91■□□□□ 0.78
TNFSF12O43508 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF12O43508 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.91■□□□□ 0.78
TNFSF12O43508 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF12O43508 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF12O43508 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF12O43508 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFSF12O43508 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L13-201ENST00000554103 1267 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L15-201ENST00000611059 1267 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L23-201ENST00000615195 1269 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L24-201ENST00000617576 1269 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L22-201ENST00000618238 1269 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L20-201ENST00000619712 1269 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L21-201ENST00000622058 1269 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L10-201ENST00000622460 1267 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 DUX4L25-201ENST00000624915 1269 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF12O43508 AC142381.3-201ENST00000568208 1670 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TNFSF12O43508 AC022211.4-201ENST00000625094 2161 ntBASIC19.9■□□□□ 0.78
TNFSF12O43508 RPS2P35-201ENST00000443417 897 ntBASIC19.89■□□□□ 0.77
TNFSF12O43508 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF12O43508 AC096887.2-201ENST00000623443 1957 ntBASIC19.88■□□□□ 0.77
TNFSF12O43508 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TNFSF12O43508 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TNFSF12O43508 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF12O43508 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TNFSF12O43508 AC138932.3-201ENST00000567634 1902 ntBASIC19.87■□□□□ 0.77
TNFSF12O43508 AC008813.1-201ENST00000536597 885 ntBASIC19.87■□□□□ 0.77
TNFSF12O43508 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF12O43508 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF12O43508 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF12O43508 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF12O43508 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TNFSF12O43508 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TNFSF12O43508 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF12O43508 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF12O43508 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TNFSF12O43508 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.86■□□□□ 0.77
TNFSF12O43508 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF12O43508 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TNFSF12O43508 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF12O43508 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF12O43508 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF12O43508 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.85■□□□□ 0.77
TNFSF12O43508 AL359258.2-201ENST00000564063 1566 ntBASIC19.85■□□□□ 0.77
TNFSF12O43508 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TNFSF12O43508 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF12O43508 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF12O43508 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFSF12O43508 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFSF12O43508 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF12O43508 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF12O43508 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.84■□□□□ 0.77
TNFSF12O43508 DUX4L11-201ENST00000611504 1267 ntBASIC19.84■□□□□ 0.77
TNFSF12O43508 DUX4L12-201ENST00000614593 1267 ntBASIC19.84■□□□□ 0.77
TNFSF12O43508 DUX4L14-201ENST00000621227 1267 ntBASIC19.84■□□□□ 0.77
TNFSF12O43508 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms