Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
TMEM88BA6NKF7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
TMEM88BA6NKF7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
TMEM88BA6NKF7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.96■■■□□ 2.23
TMEM88BA6NKF7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TMEM88BA6NKF7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.96■■■□□ 2.23
TMEM88BA6NKF7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
TMEM88BA6NKF7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
TMEM88BA6NKF7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
TMEM88BA6NKF7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
TMEM88BA6NKF7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
TMEM88BA6NKF7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.22
TMEM88BA6NKF7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.95■■■□□ 2.22
TMEM88BA6NKF7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.94■■■□□ 2.22
TMEM88BA6NKF7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TMEM88BA6NKF7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TMEM88BA6NKF7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.94■■■□□ 2.22
TMEM88BA6NKF7 MIR4466-201ENST00000606121 54 ntBASIC28.94■■■□□ 2.22
TMEM88BA6NKF7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TMEM88BA6NKF7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TMEM88BA6NKF7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
TMEM88BA6NKF7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.93■■■□□ 2.22
TMEM88BA6NKF7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
TMEM88BA6NKF7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.93■■■□□ 2.22
TMEM88BA6NKF7 AC135279.3-201ENST00000610945 1311 ntBASIC28.93■■■□□ 2.22
TMEM88BA6NKF7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
TMEM88BA6NKF7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
TMEM88BA6NKF7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.92■■■□□ 2.22
TMEM88BA6NKF7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.92■■■□□ 2.22
TMEM88BA6NKF7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
TMEM88BA6NKF7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.91■■■□□ 2.22
TMEM88BA6NKF7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.91■■■□□ 2.22
TMEM88BA6NKF7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
TMEM88BA6NKF7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TMEM88BA6NKF7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
TMEM88BA6NKF7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
TMEM88BA6NKF7 AL356740.2-201ENST00000601559 647 ntBASIC28.9■■■□□ 2.22
TMEM88BA6NKF7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.9■■■□□ 2.22
TMEM88BA6NKF7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TMEM88BA6NKF7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
TMEM88BA6NKF7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
TMEM88BA6NKF7 AC010997.5-201ENST00000609182 354 ntBASIC28.88■■■□□ 2.21
TMEM88BA6NKF7 MIR6724-1-201ENST00000616420 92 ntBASIC28.88■■■□□ 2.21
TMEM88BA6NKF7 MIR6724-2-201ENST00000616483 92 ntBASIC28.88■■■□□ 2.21
TMEM88BA6NKF7 MIR6724-4-201ENST00000617390 92 ntBASIC28.88■■■□□ 2.21
TMEM88BA6NKF7 MIR6724-3-201ENST00000622482 92 ntBASIC28.88■■■□□ 2.21
TMEM88BA6NKF7 AC142381.2-201ENST00000566120 298 ntBASIC28.87■■■□□ 2.21
TMEM88BA6NKF7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.87■■■□□ 2.21
TMEM88BA6NKF7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
TMEM88BA6NKF7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.86■■■□□ 2.21
TMEM88BA6NKF7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.86■■■□□ 2.21
TMEM88BA6NKF7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.86■■■□□ 2.21
TMEM88BA6NKF7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
TMEM88BA6NKF7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TMEM88BA6NKF7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
TMEM88BA6NKF7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
TMEM88BA6NKF7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.85■■■□□ 2.21
TMEM88BA6NKF7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.85■■■□□ 2.21
TMEM88BA6NKF7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TMEM88BA6NKF7 AC120024.1-201ENST00000562672 995 ntBASIC28.84■■■□□ 2.21
TMEM88BA6NKF7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TMEM88BA6NKF7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.84■■■□□ 2.21
TMEM88BA6NKF7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TMEM88BA6NKF7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.83■■■□□ 2.21
TMEM88BA6NKF7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TMEM88BA6NKF7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TMEM88BA6NKF7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.82■■■□□ 2.2
TMEM88BA6NKF7 AC106739.1-201ENST00000617035 715 ntBASIC28.82■■■□□ 2.2
TMEM88BA6NKF7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.82■■■□□ 2.2
TMEM88BA6NKF7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
TMEM88BA6NKF7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.81■■■□□ 2.2
TMEM88BA6NKF7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TMEM88BA6NKF7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.81■■■□□ 2.2
TMEM88BA6NKF7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
TMEM88BA6NKF7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TMEM88BA6NKF7 PBX2P1-201ENST00000493219 1291 ntBASIC28.8■■■□□ 2.2
TMEM88BA6NKF7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
TMEM88BA6NKF7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.79■■■□□ 2.2
TMEM88BA6NKF7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.79■■■□□ 2.2
TMEM88BA6NKF7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TMEM88BA6NKF7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.79■■■□□ 2.2
TMEM88BA6NKF7 WHAMMP3-201ENST00000611636 1609 ntBASIC28.78■■■□□ 2.2
TMEM88BA6NKF7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
TMEM88BA6NKF7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TMEM88BA6NKF7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.77■■■□□ 2.2
TMEM88BA6NKF7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.76■■■□□ 2.2
TMEM88BA6NKF7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.76■■■□□ 2.19
TMEM88BA6NKF7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
TMEM88BA6NKF7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TMEM88BA6NKF7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.76■■■□□ 2.19
TMEM88BA6NKF7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.76■■■□□ 2.19
TMEM88BA6NKF7 MTDHP2-201ENST00000601468 714 ntBASIC28.76■■■□□ 2.19
TMEM88BA6NKF7 AL512631.2-201ENST00000604634 923 ntBASIC28.76■■■□□ 2.19
TMEM88BA6NKF7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
TMEM88BA6NKF7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
TMEM88BA6NKF7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TMEM88BA6NKF7 KRT18P10-201ENST00000388836 1287 ntBASIC28.75■■■□□ 2.19
TMEM88BA6NKF7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.75■■■□□ 2.19
TMEM88BA6NKF7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.75■■■□□ 2.19
TMEM88BA6NKF7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms