Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV4S1A1TA0A5B7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TCRBV4S1A1TA0A5B7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV4S1A1TA0A5B7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV4S1A1TA0A5B7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV4S1A1TA0A5B7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV4S1A1TA0A5B7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
TCRBV4S1A1TA0A5B7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV4S1A1TA0A5B7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV4S1A1TA0A5B7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV4S1A1TA0A5B7 AC020928.2-201ENST00000588717 2197 ntBASIC19.33■□□□□ 0.69
TCRBV4S1A1TA0A5B7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV4S1A1TA0A5B7 KRT18P60-201ENST00000312876 1297 ntBASIC19.33■□□□□ 0.68
TCRBV4S1A1TA0A5B7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV4S1A1TA0A5B7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV4S1A1TA0A5B7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TCRBV4S1A1TA0A5B7 AC142472.1-201ENST00000612013 1741 ntBASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 TSPY13P-201ENST00000338964 914 ntBASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 AC133552.2-201ENST00000619106 1032 ntBASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TCRBV4S1A1TA0A5B7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV4S1A1TA0A5B7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV4S1A1TA0A5B7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV4S1A1TA0A5B7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TCRBV4S1A1TA0A5B7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.3■□□□□ 0.68
TCRBV4S1A1TA0A5B7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBV4S1A1TA0A5B7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV4S1A1TA0A5B7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV4S1A1TA0A5B7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV4S1A1TA0A5B7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRBV4S1A1TA0A5B7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.29■□□□□ 0.68
TCRBV4S1A1TA0A5B7 WHAMMP3-201ENST00000611636 1609 ntBASIC19.29■□□□□ 0.68
TCRBV4S1A1TA0A5B7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 AC004987.1-201ENST00000428627 508 ntBASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 ATP5G2P3-201ENST00000429083 425 ntBASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRBV4S1A1TA0A5B7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV4S1A1TA0A5B7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV4S1A1TA0A5B7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TCRBV4S1A1TA0A5B7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TCRBV4S1A1TA0A5B7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TCRBV4S1A1TA0A5B7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.27■□□□□ 0.68
TCRBV4S1A1TA0A5B7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TCRBV4S1A1TA0A5B7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 AC009831.1-201ENST00000580420 1582 ntBASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV4S1A1TA0A5B7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 RP9P-202ENST00000450133 1212 ntBASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 AL592293.1-201ENST00000502889 1188 ntBASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 AC025884.2-201ENST00000553429 711 ntBASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV4S1A1TA0A5B7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms