Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-2A0A0B4J235 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV13-2A0A0B4J235 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV13-2A0A0B4J235 KLF16-203ENST00000592313 508 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV13-2A0A0B4J235 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-2A0A0B4J235 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-2A0A0B4J235 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-2A0A0B4J235 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 AC068473.5-201ENST00000616428 2072 ntBASIC15.9■□□□□ 0.14
TRAV13-2A0A0B4J235 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV13-2A0A0B4J235 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV13-2A0A0B4J235 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-2A0A0B4J235 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-2A0A0B4J235 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TRAV13-2A0A0B4J235 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV13-2A0A0B4J235 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV13-2A0A0B4J235 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-2A0A0B4J235 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV13-2A0A0B4J235 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-2A0A0B4J235 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV13-2A0A0B4J235 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 AC135983.2-203ENST00000454486 1613 ntBASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAV13-2A0A0B4J235 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-2A0A0B4J235 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-2A0A0B4J235 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-2A0A0B4J235 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV13-2A0A0B4J235 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms