Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 AC093458.2-201ENST00000623150 629 ntBASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CYP46A1Q9Y6A2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 MIR1224-201ENST00000408193 85 ntBASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 SPDYE21P-201ENST00000413323 827 ntBASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 NUS1P2-201ENST00000417358 873 ntBASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 ABCD1P5-201ENST00000445663 754 ntBASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 SIGLEC30P-201ENST00000455569 941 ntBASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CYP46A1Q9Y6A2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CYP46A1Q9Y6A2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
CYP46A1Q9Y6A2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 GPR89P-201ENST00000407924 1495 ntBASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CYP46A1Q9Y6A2 OR6D1P-203ENST00000641209 4860 ntBASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CYP46A1Q9Y6A2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 FRMD8P1-201ENST00000440433 1524 ntBASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms