Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
YIPF1Q9Y548 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.91■□□□□ 0.46
YIPF1Q9Y548 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
YIPF1Q9Y548 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
YIPF1Q9Y548 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.91■□□□□ 0.46
YIPF1Q9Y548 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 AL355306.1-201ENST00000415580 579 ntBASIC17.9■□□□□ 0.46
YIPF1Q9Y548 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 AC099522.2-201ENST00000607001 744 ntBASIC17.9■□□□□ 0.46
YIPF1Q9Y548 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 AL121761.2-201ENST00000598007 1648 ntBASIC17.9■□□□□ 0.46
YIPF1Q9Y548 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
YIPF1Q9Y548 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.89■□□□□ 0.46
YIPF1Q9Y548 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
YIPF1Q9Y548 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 AC005412.3-201ENST00000580309 715 ntBASIC17.89■□□□□ 0.45
YIPF1Q9Y548 MIR4515-201ENST00000584082 81 ntBASIC17.89■□□□□ 0.45
YIPF1Q9Y548 AC093028.1-201ENST00000622998 982 ntBASIC17.89■□□□□ 0.45
YIPF1Q9Y548 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
YIPF1Q9Y548 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 AL139400.1-201ENST00000366220 510 ntBASIC17.88■□□□□ 0.45
YIPF1Q9Y548 SLC25A1P3-201ENST00000395415 828 ntBASIC17.88■□□□□ 0.45
YIPF1Q9Y548 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 TIMM8BP1-201ENST00000452384 211 ntBASIC17.88■□□□□ 0.45
YIPF1Q9Y548 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
YIPF1Q9Y548 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms