Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00588Q9Y4M8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 AC002310.6-201ENST00000624451 1377 ntBASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 GPX1P2-201ENST00000429271 606 ntBASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 OR7E47P-204ENST00000575924 449 ntBASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 MTDHP5-201ENST00000598980 586 ntBASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 AC010507.1-201ENST00000633895 436 ntBASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00588Q9Y4M8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 RPSAP43-201ENST00000402237 625 ntBASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 PAWRP1-201ENST00000451083 565 ntBASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 AC112482.1-201ENST00000492080 688 ntBASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 AC096734.2-201ENST00000562054 433 ntBASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 AC092865.6-201ENST00000642101 219 ntBASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00588Q9Y4M8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms