Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 IGHGP-201ENST00000390555 1178 ntBASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 HLA-F-220ENST00000434407 884 ntBASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 AC010460.3-201ENST00000511359 1579 ntBASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 AL353692.3-201ENST00000407031 1396 ntBASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UBE2D4Q9Y2X8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 LINC02199-201ENST00000506655 2702 ntBASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 FAM8A6P-201ENST00000407496 1135 ntBASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 AP003733.1-201ENST00000491725 852 ntBASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 EGFEM1P-202ENST00000431685 1563 ntBASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 PCDHB17P-201ENST00000539533 2393 ntBASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBE2D4Q9Y2X8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D4Q9Y2X8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
UBE2D4Q9Y2X8 AC008741.2-201ENST00000612792 3115 ntBASIC12.02□□□□□ -0.48
UBE2D4Q9Y2X8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms