Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 GPR89P-201ENST00000407924 1495 ntBASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 AD000864.1-201ENST00000624076 2295 ntBASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.17■□□□□ 0.34
VPS9D1Q9Y2B5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 AP000240.1-201ENST00000609910 452 ntBASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 AL121772.3-201ENST00000610840 674 ntBASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 AC079776.2-201ENST00000641154 1609 ntBASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS9D1Q9Y2B5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 RBM17P3-201ENST00000417687 1192 ntBASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 HCG4P8-203ENST00000443049 980 ntBASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 AC091917.2-201ENST00000505002 744 ntBASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS9D1Q9Y2B5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.14■□□□□ 0.34
VPS9D1Q9Y2B5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VPS9D1Q9Y2B5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 AP005117.1-201ENST00000584346 1413 ntBASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS9D1Q9Y2B5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms