Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 AL356488.2-201ENST00000602755 427 ntBASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 AC080080.1-201ENST00000625121 2420 ntBASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 AC243591.1-201ENST00000452967 1364 ntBASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHA4Q9UN74 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 RPS15P9-201ENST00000494093 319 ntBASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 TERC-201ENST00000602385 541 ntBASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHA4Q9UN74 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHA4Q9UN74 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHA4Q9UN74 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 AC026396.1-201ENST00000419388 421 ntBASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 PAWRP1-201ENST00000451083 565 ntBASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 MIR1199-201ENST00000621445 119 ntBASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHA4Q9UN74 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHA4Q9UN74 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms