Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00474Q9P2X8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 NSUN5P1-202ENST00000421140 1535 ntBASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 NSUN5P2-203ENST00000457352 1529 ntBASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AP002383.4-201ENST00000442518 975 ntBASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AC096582.2-201ENST00000510860 516 ntBASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PRELID1P1-202ENST00000567272 903 ntBASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AC011467.2-201ENST00000598425 242 ntBASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AC092119.3-201ENST00000612618 583 ntBASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AC114341.1-201ENST00000618070 349 ntBASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00474Q9P2X8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LINC00474Q9P2X8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms