Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.393e-6■□□□□ 9.4
DROSHAQ9NRR4 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC16.17■□□□□ 0.184e-21■□□□□ 9.4
DROSHAQ9NRR4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.692e-7■□□□□ 9.4
DROSHAQ9NRR4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.652e-7■□□□□ 9.4
DROSHAQ9NRR4 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.12e-7■□□□□ 9.4
DROSHAQ9NRR4 ENY2-215ENST00000523335 1540 ntTSL 227.09■■□□□ 1.937e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-212ENST00000522407 541 ntTSL 425.09■■□□□ 1.617e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-213ENST00000522632 587 ntTSL 221.86■■□□□ 1.097e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-206ENST00000518584 566 ntTSL 221.44■■□□□ 1.027e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-204ENST00000517756 445 ntTSL 519.67■□□□□ 0.747e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-203ENST00000517350 2150 ntTSL 1 (best)19.22■□□□□ 0.677e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-210ENST00000521662 562 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.367e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-214ENST00000522766 567 ntTSL 417.33■□□□□ 0.367e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-207ENST00000519754 561 ntTSL 416.58■□□□□ 0.247e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-201ENST00000339942 546 ntTSL 415.1■□□□□ 0.017e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-208ENST00000520147 857 ntTSL 4 BASIC14.86□□□□□ -0.037e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-202ENST00000517311 2966 ntTSL 214.36□□□□□ -0.117e-10■□□□□ 9.4
DROSHAQ9NRR4 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC12.21□□□□□ -0.467e-10■□□□□ 9.4
DROSHAQ9NRR4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC12.05□□□□□ -0.487e-10■□□□□ 9.4
DROSHAQ9NRR4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.957e-10■□□□□ 9.4
DROSHAQ9NRR4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.35□□□□□ -1.717e-10■□□□□ 9.4
DROSHAQ9NRR4 SCARNA9-201ENST00000530422 353 ntBASIC8.77□□□□□ -1.015e-44■□□□□ 9.4
DROSHAQ9NRR4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.145e-44■□□□□ 9.4
DROSHAQ9NRR4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.86□□□□□ -1.315e-44■□□□□ 9.4
DROSHAQ9NRR4 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 44.13□□□□□ -1.755e-44■□□□□ 9.4
DROSHAQ9NRR4 CNOT6-206ENST00000510148 456 ntTSL 438.89■■■■□ 3.821e-19■□□□□ 9.4
DROSHAQ9NRR4 CNOT6-205ENST00000507016 382 ntTSL 336.14■■■■□ 3.381e-19■□□□□ 9.4
DROSHAQ9NRR4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.151e-19■□□□□ 9.4
DROSHAQ9NRR4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.041e-19■□□□□ 9.4
DROSHAQ9NRR4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.751e-19■□□□□ 9.4
DROSHAQ9NRR4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.18e-12■□□□□ 9.4
DROSHAQ9NRR4 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.42□□□□□ -0.92e-10■□□□□ 9.4
DROSHAQ9NRR4 FUS-203ENST00000474990 827 ntTSL 335.27■■■■□ 3.244e-9■□□□□ 9.4
DROSHAQ9NRR4 PTP4A1-203ENST00000473334 638 ntTSL 334.61■■■■□ 3.139e-9■□□□□ 9.4
DROSHAQ9NRR4 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC15.75■□□□□ 0.113e-10■□□□□ 9.4
DROSHAQ9NRR4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC33.21■■■□□ 2.911e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC30.33■■■□□ 2.451e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC29.8■■■□□ 2.361e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-224ENST00000581718 574 ntTSL 229.53■■■□□ 2.321e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-228ENST00000584141 564 ntTSL 228.53■■■□□ 2.161e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-203ENST00000472367 794 ntTSL 327.46■■□□□ 1.991e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-212ENST00000483588 688 ntTSL 326.51■■□□□ 1.831e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-229ENST00000584177 574 ntTSL 425.79■■□□□ 1.721e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC21.76■■□□□ 1.071e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC21.76■■□□□ 1.071e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC20.81■□□□□ 0.921e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC20.65■□□□□ 0.91e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-215ENST00000491009 863 ntTSL 220.34■□□□□ 0.851e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-206ENST00000477249 891 ntTSL 520.09■□□□□ 0.811e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-219ENST00000578757 920 ntTSL 1 (best)20.09■□□□□ 0.811e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-217ENST00000497774 1662 ntTSL 520.01■□□□□ 0.791e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC19.25■□□□□ 0.671e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-227ENST00000583400 712 ntTSL 416.21■□□□□ 0.191e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-207ENST00000478103 712 ntTSL 316.19■□□□□ 0.181e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-201ENST00000460249 773 ntTSL 315.78■□□□□ 0.121e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-204ENST00000475947 598 ntTSL 215.78■□□□□ 0.121e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-222ENST00000580770 572 ntTSL 415.78■□□□□ 0.121e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC15.13■□□□□ 0.011e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-221ENST00000580180 753 ntTSL 214.41□□□□□ -0.11e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC12.74□□□□□ -0.371e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)12.49□□□□□ -0.411e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-230ENST00000584926 604 ntTSL 512.49□□□□□ -0.411e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-216ENST00000492250 565 ntTSL 57.71□□□□□ -1.171e-8■□□□□ 9.3
DROSHAQ9NRR4 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.2□□□□□ -1.421e-8■□□□□ 9.3
DROSHAQ9NRR4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.281e-8■□□□□ 9.3
DROSHAQ9NRR4 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.191e-8■□□□□ 9.3
DROSHAQ9NRR4 AC074143.1-201ENST00000580114 1287 ntAPPRIS P5 TSL 539.24■■■■□ 3.873e-7■□□□□ 9.3
DROSHAQ9NRR4 MBD3-211ENST00000592965 568 ntTSL 436.08■■■■□ 3.373e-7■□□□□ 9.3
DROSHAQ9NRR4 TRAP1-207ENST00000571804 781 ntTSL 535.47■■■■□ 3.273e-7■□□□□ 9.3
DROSHAQ9NRR4 TRAP1-215ENST00000576106 555 ntTSL 434.97■■■■□ 3.193e-7■□□□□ 9.3
DROSHAQ9NRR4 TRAP1-203ENST00000570403 521 ntTSL 434.89■■■■□ 3.183e-7■□□□□ 9.3
DROSHAQ9NRR4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC33.98■■■■□ 3.033e-7■□□□□ 9.3
DROSHAQ9NRR4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.023e-7■□□□□ 9.3
DROSHAQ9NRR4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC33.43■■■□□ 2.943e-7■□□□□ 9.3
DROSHAQ9NRR4 POLD2-214ENST00000481104 541 ntTSL 233.29■■■□□ 2.923e-7■□□□□ 9.3
DROSHAQ9NRR4 TRAP1-205ENST00000571011 480 ntTSL 533.03■■■□□ 2.883e-7■□□□□ 9.3
DROSHAQ9NRR4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.873e-7■□□□□ 9.3
DROSHAQ9NRR4 SMG7-205ENST00000440812 1190 ntTSL 532.88■■■□□ 2.853e-7■□□□□ 9.3
DROSHAQ9NRR4 HAUS4-207ENST00000553794 570 ntTSL 532.6■■■□□ 2.813e-7■□□□□ 9.3
DROSHAQ9NRR4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.793e-7■□□□□ 9.3
DROSHAQ9NRR4 POLD2-204ENST00000433715 765 ntTSL 332.2■■■□□ 2.753e-7■□□□□ 9.3
DROSHAQ9NRR4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.733e-7■□□□□ 9.3
DROSHAQ9NRR4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC31.83■■■□□ 2.693e-7■□□□□ 9.3
DROSHAQ9NRR4 MBD3-205ENST00000589064 1475 ntTSL 231.68■■■□□ 2.663e-7■□□□□ 9.3
DROSHAQ9NRR4 IDUA-208ENST00000509948 796 ntTSL 331.63■■■□□ 2.653e-7■□□□□ 9.3
DROSHAQ9NRR4 SCAF8-204ENST00000461219 677 ntTSL 531.22■■■□□ 2.593e-7■□□□□ 9.3
DROSHAQ9NRR4 IDUA-203ENST00000502910 714 ntTSL 331.21■■■□□ 2.593e-7■□□□□ 9.3
DROSHAQ9NRR4 HAUS4-215ENST00000554651 815 ntTSL 331.01■■■□□ 2.553e-7■□□□□ 9.3
DROSHAQ9NRR4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC30.6■■■□□ 2.493e-7■□□□□ 9.3
DROSHAQ9NRR4 POLD2-211ENST00000464871 580 ntTSL 330.28■■■□□ 2.443e-7■□□□□ 9.3
DROSHAQ9NRR4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.15■■■□□ 2.423e-7■□□□□ 9.3
DROSHAQ9NRR4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.413e-7■□□□□ 9.3
DROSHAQ9NRR4 TRAP1-211ENST00000574941 558 ntTSL 430.03■■■□□ 2.43e-7■□□□□ 9.3
DROSHAQ9NRR4 IDUA-204ENST00000504568 586 ntTSL 329.8■■■□□ 2.363e-7■□□□□ 9.3
DROSHAQ9NRR4 IDUA-209ENST00000514192 697 ntTSL 329.59■■■□□ 2.333e-7■□□□□ 9.3
DROSHAQ9NRR4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC29.57■■■□□ 2.323e-7■□□□□ 9.3
DROSHAQ9NRR4 SMG7-203ENST00000367538 328 ntTSL 229.46■■■□□ 2.313e-7■□□□□ 9.3
DROSHAQ9NRR4 MBD3-209ENST00000592012 2379 ntTSL 529.1■■■□□ 2.253e-7■□□□□ 9.3
DROSHAQ9NRR4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC28.95■■■□□ 2.233e-7■□□□□ 9.3
DROSHAQ9NRR4 SMG7-206ENST00000444547 580 ntTSL 428.94■■■□□ 2.223e-7■□□□□ 9.3
Retrieved 100 of 16,331 protein–RNA pairs in 342.1 ms