Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
CDC42SE2Q9NRR3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.9□□□□□ -0.51
CDC42SE2Q9NRR3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CDC42SE2Q9NRR3 PCDH8P1-201ENST00000428983 2773 ntBASIC11.9□□□□□ -0.51
CDC42SE2Q9NRR3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 AL049757.1-201ENST00000616842 1596 ntBASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 GUSBP12-201ENST00000513727 720 ntBASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CDC42SE2Q9NRR3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AC125634.1-201ENST00000438758 1403 ntBASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AC113347.1-201ENST00000413321 391 ntBASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AL596275.1-201ENST00000423464 877 ntBASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 TSPY5P-201ENST00000426936 936 ntBASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AC117947.1-201ENST00000427448 529 ntBASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AC112907.2-201ENST00000448639 330 ntBASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 RNF126P1-202ENST00000569893 925 ntBASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 AC005363.2-201ENST00000618631 242 ntBASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CDC42SE2Q9NRR3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms