Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.5■□□□□ 0.39
SPHK2Q9NRA0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK2Q9NRA0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK2Q9NRA0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK2Q9NRA0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.5■□□□□ 0.39
SPHK2Q9NRA0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 AC002056.1-201ENST00000395613 760 ntBASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 MIR4515-201ENST00000584082 81 ntBASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.49■□□□□ 0.39
SPHK2Q9NRA0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 AC140658.5-201ENST00000438532 169 ntBASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 AC005412.3-201ENST00000580309 715 ntBASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 AL138688.1-201ENST00000624851 1594 ntBASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 GNAS-203ENST00000306120 1878 ntBASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPHK2Q9NRA0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 AC093525.9-201ENST00000624961 1746 ntBASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SPHK2Q9NRA0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms