Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 LINC00538-201ENST00000626109 1906 ntBASIC20.44■□□□□ 0.86
RTN4Q9NQC3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 AL355312.1-201ENST00000407115 2176 ntBASIC20.44■□□□□ 0.86
RTN4Q9NQC3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC20.44■□□□□ 0.86
RTN4Q9NQC3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 AC107918.4-201ENST00000641966 3141 ntBASIC20.43■□□□□ 0.86
RTN4Q9NQC3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.43■□□□□ 0.86
RTN4Q9NQC3 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 AP001542.1-201ENST00000591314 200 ntBASIC20.43■□□□□ 0.86
RTN4Q9NQC3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN4Q9NQC3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 NTM-206ENST00000427481 2583 ntTSL 5 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20.42■□□□□ 0.86
RTN4Q9NQC3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 AC121493.1-201ENST00000602316 450 ntBASIC20.42■□□□□ 0.86
RTN4Q9NQC3 AC092666.2-201ENST00000613287 246 ntBASIC20.42■□□□□ 0.86
RTN4Q9NQC3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN4Q9NQC3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 AC060834.1-201ENST00000443027 2032 ntBASIC20.41■□□□□ 0.86
RTN4Q9NQC3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 HLA-L-209ENST00000420110 1011 ntBASIC20.41■□□□□ 0.86
RTN4Q9NQC3 RPS2P4-201ENST00000476944 856 ntBASIC20.41■□□□□ 0.86
RTN4Q9NQC3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 AL353708.3-201ENST00000610272 989 ntBASIC20.41■□□□□ 0.86
RTN4Q9NQC3 AC110285.5-201ENST00000611501 352 ntBASIC20.41■□□□□ 0.86
RTN4Q9NQC3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.41■□□□□ 0.86
RTN4Q9NQC3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RTN4Q9NQC3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms