Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.12■□□□□ 0.33
SSU72Q9NP77 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.12■□□□□ 0.33
SSU72Q9NP77 AL031432.5-201ENST00000641059 760 ntBASIC17.12■□□□□ 0.33
SSU72Q9NP77 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSU72Q9NP77 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SSU72Q9NP77 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSU72Q9NP77 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSU72Q9NP77 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSU72Q9NP77 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 ME2P1-201ENST00000426028 1970 ntBASIC17.11■□□□□ 0.33
SSU72Q9NP77 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 AC092364.2-201ENST00000596710 2692 ntBASIC17.11■□□□□ 0.33
SSU72Q9NP77 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSU72Q9NP77 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.11■□□□□ 0.33
SSU72Q9NP77 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 SPDYE15P-201ENST00000424157 909 ntBASIC17.1■□□□□ 0.33
SSU72Q9NP77 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 AL023973.1-201ENST00000624619 620 ntBASIC17.1■□□□□ 0.33
SSU72Q9NP77 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSU72Q9NP77 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSU72Q9NP77 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSU72Q9NP77 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SSU72Q9NP77 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSU72Q9NP77 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.09■□□□□ 0.33
SSU72Q9NP77 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSU72Q9NP77 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSU72Q9NP77 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSU72Q9NP77 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SSU72Q9NP77 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms