Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 FGFR3P6-201ENST00000457012 610 ntBASIC15.11■□□□□ 0.01
CDH20Q9HBT6 BX005266.1-201ENST00000473402 457 ntBASIC15.11■□□□□ 0.01
CDH20Q9HBT6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 AF238378.1-201ENST00000526806 358 ntBASIC15.11■□□□□ 0.01
CDH20Q9HBT6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 SIGLEC16-201ENST00000599858 1437 ntBASIC15.1■□□□□ 0.01
CDH20Q9HBT6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 AC073648.2-201ENST00000510116 352 ntBASIC15.1■□□□□ 0.01
CDH20Q9HBT6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 AL121912.1-201ENST00000603683 238 ntBASIC15.1■□□□□ 0.01
CDH20Q9HBT6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH20Q9HBT6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms