Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 TOP3BP1-201ENST00000420768 1380 ntBASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 CD81-202ENST00000381036 880 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 AC008761.3-201ENST00000624803 892 ntBASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 AC133963.1-201ENST00000504166 1679 ntBASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 EGFEM1P-202ENST00000431685 1563 ntBASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.15■■□□□ 1.14
PCDH11XQ9BZA7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 AC005225.4-201ENST00000557330 545 ntBASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 AC027307.2-201ENST00000591252 911 ntBASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC22.14■■□□□ 1.14
PCDH11XQ9BZA7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH11XQ9BZA7 AL355312.1-201ENST00000407115 2176 ntBASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 AC004408.2-201ENST00000623613 2777 ntBASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 AC012317.2-201ENST00000623305 2251 ntBASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 MIR346-201ENST00000362234 95 ntBASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 LINC02560-201ENST00000596379 459 ntBASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH11XQ9BZA7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms