Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC8.78□□□□□ -1
KRTAP3-1Q9BYR8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC8.78□□□□□ -1
KRTAP3-1Q9BYR8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP3-1Q9BYR8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC8.77□□□□□ -1
KRTAP3-1Q9BYR8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 HLA-A-202ENST00000376806 1854 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 MIR662-201ENST00000384847 95 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 DDT-203ENST00000403754 569 ntTSL 3 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 SPDYE15P-201ENST00000424157 909 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 DDT-206ENST00000430101 573 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 AL049829.1-201ENST00000465411 156 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 AL441883.1-201ENST00000566170 1045 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 ALOX12P2-203ENST00000570921 1945 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 PAUPAR-201ENST00000630360 2965 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 AL049757.1-201ENST00000616842 1596 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 AC024909.3-201ENST00000611513 2257 ntBASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
KRTAP3-1Q9BYR8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP3-1Q9BYR8 CASC19-229ENST00000641418 1373 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms