Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 AC092068.3-201ENST00000587894 2016 ntBASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC4.67□□□□□ -1.66
LCE3DQ9BYE3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 RHBDF1P1-201ENST00000427504 1941 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms