Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 HMGN1P19-201ENST00000436976 333 ntBASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 AL355385.1-201ENST00000606123 409 ntBASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 AC093525.9-201ENST00000624961 1746 ntBASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAAF1Q9BRP4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 NOC2LP2-201ENST00000407594 1944 ntBASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 EGFEM1P-202ENST00000431685 1563 ntBASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 ACTG1P14-201ENST00000446382 1122 ntBASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.27■□□□□ 0.52
PAAF1Q9BRP4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAAF1Q9BRP4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PAAF1Q9BRP4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAAF1Q9BRP4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAAF1Q9BRP4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.27■□□□□ 0.51
PAAF1Q9BRP4 GNAS-203ENST00000306120 1878 ntBASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 AC004461.1-201ENST00000412461 403 ntBASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 ADH5P3-201ENST00000433842 1137 ntBASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 AL513210.1-201ENST00000629608 234 ntBASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 AC105339.1-204ENST00000636249 355 ntBASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
PAAF1Q9BRP4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.25■□□□□ 0.51
PAAF1Q9BRP4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PAAF1Q9BRP4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PAAF1Q9BRP4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.25■□□□□ 0.51
PAAF1Q9BRP4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms