Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.25■□□□□ 0.35
CPNE1Q99829 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.25■□□□□ 0.35
CPNE1Q99829 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.25■□□□□ 0.35
CPNE1Q99829 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE1Q99829 CHCHD2P8-201ENST00000429873 447 ntBASIC17.25■□□□□ 0.35
CPNE1Q99829 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CPNE1Q99829 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.25■□□□□ 0.35
CPNE1Q99829 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE1Q99829 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE1Q99829 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.25■□□□□ 0.35
CPNE1Q99829 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.25■□□□□ 0.35
CPNE1Q99829 AL121672.3-201ENST00000608644 468 ntBASIC17.25■□□□□ 0.35
CPNE1Q99829 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CPNE1Q99829 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE1Q99829 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE1Q99829 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE1Q99829 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 AL603756.1-201ENST00000606511 2163 ntBASIC17.25■□□□□ 0.35
CPNE1Q99829 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 CROCCP1-201ENST00000426910 5675 ntBASIC17.25■□□□□ 0.35
CPNE1Q99829 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CPNE1Q99829 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
CPNE1Q99829 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.24■□□□□ 0.35
CPNE1Q99829 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.24■□□□□ 0.35
CPNE1Q99829 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CPNE1Q99829 BX276092.5-203ENST00000456199 560 ntBASIC17.24■□□□□ 0.35
CPNE1Q99829 AC091607.1-201ENST00000490318 1060 ntBASIC17.24■□□□□ 0.35
CPNE1Q99829 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.24■□□□□ 0.35
CPNE1Q99829 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CPNE1Q99829 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.24■□□□□ 0.35
CPNE1Q99829 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.24■□□□□ 0.35
CPNE1Q99829 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE1Q99829 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.23■□□□□ 0.35
CPNE1Q99829 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CPNE1Q99829 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.23■□□□□ 0.35
CPNE1Q99829 TMPOP1-202ENST00000424642 1267 ntBASIC17.23■□□□□ 0.35
CPNE1Q99829 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.23■□□□□ 0.35
CPNE1Q99829 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 NTF6B-201ENST00000591913 560 ntBASIC17.23■□□□□ 0.35
CPNE1Q99829 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.23■□□□□ 0.35
CPNE1Q99829 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.23■□□□□ 0.35
CPNE1Q99829 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 AL121956.5-201ENST00000625261 221 ntBASIC17.23■□□□□ 0.35
CPNE1Q99829 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.23■□□□□ 0.35
CPNE1Q99829 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CPNE1Q99829 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.23■□□□□ 0.35
CPNE1Q99829 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE1Q99829 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.23■□□□□ 0.35
CPNE1Q99829 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE1Q99829 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CPNE1Q99829 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CPNE1Q99829 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE1Q99829 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CPNE1Q99829 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE1Q99829 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms