Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.92■□□□□ 0.3
NPAS2Q99743 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.92■□□□□ 0.3
NPAS2Q99743 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS2Q99743 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.92■□□□□ 0.3
NPAS2Q99743 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS2Q99743 TPSP2-201ENST00000561760 610 ntBASIC16.92■□□□□ 0.3
NPAS2Q99743 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NPAS2Q99743 AC008687.5-201ENST00000593746 558 ntBASIC16.92■□□□□ 0.3
NPAS2Q99743 GPR32P1-201ENST00000601788 811 ntBASIC16.92■□□□□ 0.3
NPAS2Q99743 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NPAS2Q99743 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 KRT18P1-202ENST00000452408 1331 ntBASIC16.92■□□□□ 0.3
NPAS2Q99743 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS2Q99743 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
NPAS2Q99743 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS2Q99743 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS2Q99743 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS2Q99743 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS2Q99743 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS2Q99743 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NPAS2Q99743 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.91■□□□□ 0.3
NPAS2Q99743 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS2Q99743 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NPAS2Q99743 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.91■□□□□ 0.3
NPAS2Q99743 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS2Q99743 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.91■□□□□ 0.3
NPAS2Q99743 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
NPAS2Q99743 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NPAS2Q99743 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 LINC02199-201ENST00000506655 2702 ntBASIC16.91■□□□□ 0.3
NPAS2Q99743 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NPAS2Q99743 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
NPAS2Q99743 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS2Q99743 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NPAS2Q99743 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 AC046185.3-201ENST00000623228 1824 ntBASIC16.91■□□□□ 0.3
NPAS2Q99743 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS2Q99743 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NPAS2Q99743 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.9■□□□□ 0.3
NPAS2Q99743 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 AL603756.1-201ENST00000606511 2163 ntBASIC16.9■□□□□ 0.3
NPAS2Q99743 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.9■□□□□ 0.3
NPAS2Q99743 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.9■□□□□ 0.3
NPAS2Q99743 AL450487.1-201ENST00000426799 995 ntBASIC16.9■□□□□ 0.3
NPAS2Q99743 DRAXINP1-201ENST00000437611 948 ntBASIC16.9■□□□□ 0.3
NPAS2Q99743 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NPAS2Q99743 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.9■□□□□ 0.3
NPAS2Q99743 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NPAS2Q99743 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NPAS2Q99743 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS2Q99743 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS2Q99743 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms