Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
TRGV9Q99603 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRGV9Q99603 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.46□□□□□ -0.25
TRGV9Q99603 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TRGV9Q99603 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 AL645929.1-201ENST00000420084 975 ntBASIC13.46□□□□□ -0.25
TRGV9Q99603 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.46□□□□□ -0.25
TRGV9Q99603 KRT18P57-201ENST00000443599 1254 ntBASIC13.46□□□□□ -0.25
TRGV9Q99603 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.46□□□□□ -0.25
TRGV9Q99603 STK19B-204ENST00000512515 211 ntBASIC13.46□□□□□ -0.25
TRGV9Q99603 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.46□□□□□ -0.25
TRGV9Q99603 AP002490.2-201ENST00000524791 560 ntBASIC13.46□□□□□ -0.25
TRGV9Q99603 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 AC005336.2-201ENST00000593183 939 ntBASIC13.46□□□□□ -0.25
TRGV9Q99603 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.46□□□□□ -0.25
TRGV9Q99603 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 AC083849.1-201ENST00000615227 514 ntBASIC13.46□□□□□ -0.25
TRGV9Q99603 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRGV9Q99603 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
TRGV9Q99603 UBALD1-205ENST00000590891 2641 ntBASIC13.46□□□□□ -0.25
TRGV9Q99603 GPR89P-201ENST00000407924 1495 ntBASIC13.46□□□□□ -0.25
TRGV9Q99603 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRGV9Q99603 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.46□□□□□ -0.25
TRGV9Q99603 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.46□□□□□ -0.25
TRGV9Q99603 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.46□□□□□ -0.26
TRGV9Q99603 AL135999.2-201ENST00000622438 1686 ntBASIC13.46□□□□□ -0.26
TRGV9Q99603 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRGV9Q99603 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRGV9Q99603 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRGV9Q99603 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRGV9Q99603 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRGV9Q99603 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRGV9Q99603 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRGV9Q99603 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRGV9Q99603 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
TRGV9Q99603 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRGV9Q99603 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRGV9Q99603 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 AC003669.1-201ENST00000334569 611 ntBASIC13.45□□□□□ -0.26
TRGV9Q99603 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.45□□□□□ -0.26
TRGV9Q99603 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.45□□□□□ -0.26
TRGV9Q99603 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.45□□□□□ -0.26
TRGV9Q99603 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.45□□□□□ -0.26
TRGV9Q99603 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.45□□□□□ -0.26
TRGV9Q99603 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRGV9Q99603 RNF216P1-203ENST00000404404 2427 ntBASIC13.45□□□□□ -0.26
TRGV9Q99603 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.45□□□□□ -0.26
TRGV9Q99603 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.45□□□□□ -0.26
TRGV9Q99603 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRGV9Q99603 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.44□□□□□ -0.26
TRGV9Q99603 FRMD8P1-201ENST00000440433 1524 ntBASIC13.44□□□□□ -0.26
TRGV9Q99603 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms