Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 AL355802.2-201ENST00000402069 882 ntBASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 AC005104.2-201ENST00000427818 678 ntBASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 AC098934.4-201ENST00000564127 592 ntBASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 MYC-209ENST00000641252 345 ntBASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 AL365209.1-201ENST00000624418 6473 ntBASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RAB3IPQ96QF0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 AC011298.2-201ENST00000617989 482 ntBASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 AC006538.1-201ENST00000567905 1585 ntBASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB3IPQ96QF0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 SLC25A1P3-201ENST00000395415 828 ntBASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 AC008687.5-201ENST00000593746 558 ntBASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms