Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 AC239800.4-201ENST00000603712 296 ntBASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 AC068137.2-201ENST00000605408 478 ntBASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC46A1Q96NT5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.46■□□□□ 0.22
SLC46A1Q96NT5 GNAS-203ENST00000306120 1878 ntBASIC16.46■□□□□ 0.22
SLC46A1Q96NT5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SLC46A1Q96NT5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 AC018470.1-201ENST00000624790 3129 ntBASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 AC012317.2-201ENST00000623305 2251 ntBASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC46A1Q96NT5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC46A1Q96NT5 AC092474.2-201ENST00000424288 719 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms