Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AL513190.1-201ENST00000621254 727 ntBASIC14.04□□□□□ -0.16
ZNF48Q96MX3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AC002310.6-201ENST00000624451 1377 ntBASIC14.04□□□□□ -0.16
ZNF48Q96MX3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AC097637.2-201ENST00000624096 1997 ntBASIC14.03□□□□□ -0.16
ZNF48Q96MX3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 IGHV3-52-201ENST00000519770 353 ntBASIC14.03□□□□□ -0.16
ZNF48Q96MX3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 AC009336.1-201ENST00000608941 1553 ntBASIC14.03□□□□□ -0.16
ZNF48Q96MX3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF48Q96MX3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 PKD1P1-201ENST00000458669 6805 ntBASIC14.02□□□□□ -0.16
ZNF48Q96MX3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF48Q96MX3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF48Q96MX3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms