Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 AL391256.1-201ENST00000443260 1855 ntBASIC14.85□□□□□ -0.03
CMTM3Q96MX0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 AC128676.1-201ENST00000454392 318 ntBASIC14.85□□□□□ -0.03
CMTM3Q96MX0 HLA-J-202ENST00000469281 1241 ntBASIC14.85□□□□□ -0.03
CMTM3Q96MX0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.85□□□□□ -0.03
CMTM3Q96MX0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 AL157888.1-201ENST00000631930 593 ntBASIC14.84□□□□□ -0.03
CMTM3Q96MX0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CMTM3Q96MX0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.83□□□□□ -0.03
CMTM3Q96MX0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.83□□□□□ -0.03
CMTM3Q96MX0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMTM3Q96MX0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CMTM3Q96MX0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMTM3Q96MX0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.83□□□□□ -0.03
CMTM3Q96MX0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.83□□□□□ -0.04
CMTM3Q96MX0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.83□□□□□ -0.04
CMTM3Q96MX0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms