Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 AL136038.4-201ENST00000603606 1261 ntBASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NSMCE2Q96MF7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 AL662844.4-201ENST00000606367 2838 ntBASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 FAM87A-204ENST00000613235 858 ntBASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 AL391807.1-203ENST00000604392 2365 ntBASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NSMCE2Q96MF7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 MTCL1P1-201ENST00000446207 792 ntBASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 TSPY20P-201ENST00000450910 630 ntBASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.29■□□□□ 0.2
NSMCE2Q96MF7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms