Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 AC104640.1-201ENST00000562617 2109 ntBASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 CA15P1-201ENST00000481698 905 ntBASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 AP000525.1-201ENST00000608286 694 ntBASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP6Q96FZ7 KRT8P47-201ENST00000604727 1398 ntBASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 RBM17P1-201ENST00000453646 1190 ntBASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 AL139327.4-201ENST00000612362 153 ntBASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 KRT17P2-201ENST00000300992 1314 ntBASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHMP6Q96FZ7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
CHMP6Q96FZ7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 BX276092.7-203ENST00000637198 1536 ntBASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 MIR1238-201ENST00000408483 83 ntBASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 AL390955.1-201ENST00000428694 934 ntBASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.39■□□□□ 0.37
CHMP6Q96FZ7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms