Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 HLA-J-201ENST00000462773 1622 ntBASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 PRYP5-201ENST00000451909 266 ntBASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 SIGLEC16-201ENST00000599858 1437 ntBASIC17.12■□□□□ 0.33
SH3KBP1Q96B97 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 FER1L4-210ENST00000615531 5998 ntBASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 AC073592.4-201ENST00000623827 446 ntBASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 AC073592.5-201ENST00000624854 528 ntBASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.11■□□□□ 0.33
SH3KBP1Q96B97 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 RPS2P1-201ENST00000434010 821 ntBASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 AP000347.1-202ENST00000435868 847 ntBASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 HNRNPDP1-201ENST00000439535 754 ntBASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 IGHV3-52-201ENST00000519770 353 ntBASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 AL353593.2-201ENST00000602529 1483 ntBASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.1■□□□□ 0.33
SH3KBP1Q96B97 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH3KBP1Q96B97 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms