Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9Q92623 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9Q92623 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TTC9Q92623 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TTC9Q92623 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TTC9Q92623 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 AC004817.3-201ENST00000602957 2129 ntBASIC16.42■□□□□ 0.22
TTC9Q92623 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9Q92623 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TTC9Q92623 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
TTC9Q92623 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.42■□□□□ 0.22
TTC9Q92623 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
TTC9Q92623 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9Q92623 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9Q92623 AC108073.2-201ENST00000464002 357 ntBASIC16.42■□□□□ 0.22
TTC9Q92623 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 MIR4751-201ENST00000578027 74 ntBASIC16.42■□□□□ 0.22
TTC9Q92623 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.42■□□□□ 0.22
TTC9Q92623 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TTC9Q92623 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TTC9Q92623 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TTC9Q92623 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.42■□□□□ 0.22
TTC9Q92623 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TTC9Q92623 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.41■□□□□ 0.22
TTC9Q92623 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC9Q92623 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC9Q92623 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
TTC9Q92623 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.41■□□□□ 0.22
TTC9Q92623 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC9Q92623 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC9Q92623 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TTC9Q92623 AC190387.1-201ENST00000551683 408 ntBASIC16.41■□□□□ 0.22
TTC9Q92623 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC9Q92623 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC9Q92623 MIR4745-201ENST00000577608 62 ntBASIC16.41■□□□□ 0.22
TTC9Q92623 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.41■□□□□ 0.22
TTC9Q92623 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.41■□□□□ 0.22
TTC9Q92623 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TTC9Q92623 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TTC9Q92623 SIGLEC16-201ENST00000599858 1437 ntBASIC16.41■□□□□ 0.22
TTC9Q92623 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TTC9Q92623 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.41■□□□□ 0.22
TTC9Q92623 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TTC9Q92623 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.41■□□□□ 0.22
TTC9Q92623 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TTC9Q92623 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TTC9Q92623 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC9Q92623 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TTC9Q92623 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC9Q92623 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms