Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT9Q92600 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CNOT9Q92600 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CNOT9Q92600 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CNOT9Q92600 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CNOT9Q92600 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CNOT9Q92600 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT9Q92600 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CNOT9Q92600 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.92■□□□□ 0.14
CNOT9Q92600 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.92■□□□□ 0.14
CNOT9Q92600 MIR5100-201ENST00000579544 119 ntBASIC15.92■□□□□ 0.14
CNOT9Q92600 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 AC138894.3-201ENST00000603787 634 ntBASIC15.92■□□□□ 0.14
CNOT9Q92600 AL121761.2-201ENST00000598007 1648 ntBASIC15.92■□□□□ 0.14
CNOT9Q92600 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CNOT9Q92600 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
CNOT9Q92600 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT9Q92600 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CNOT9Q92600 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT9Q92600 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT9Q92600 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT9Q92600 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT9Q92600 AC092053.1-201ENST00000605787 1936 ntBASIC15.92■□□□□ 0.14
CNOT9Q92600 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT9Q92600 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CNOT9Q92600 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT9Q92600 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT9Q92600 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CNOT9Q92600 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CNOT9Q92600 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CNOT9Q92600 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CNOT9Q92600 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CNOT9Q92600 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.91■□□□□ 0.14
CNOT9Q92600 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.91■□□□□ 0.14
CNOT9Q92600 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT9Q92600 AP000867.4-201ENST00000641616 219 ntBASIC15.91■□□□□ 0.14
CNOT9Q92600 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CNOT9Q92600 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT9Q92600 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT9Q92600 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CNOT9Q92600 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 AC008894.3-201ENST00000624324 3103 ntBASIC15.9■□□□□ 0.14
CNOT9Q92600 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.9■□□□□ 0.14
CNOT9Q92600 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CNOT9Q92600 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CNOT9Q92600 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT9Q92600 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.9■□□□□ 0.14
CNOT9Q92600 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CNOT9Q92600 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CNOT9Q92600 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.9■□□□□ 0.14
CNOT9Q92600 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CNOT9Q92600 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CNOT9Q92600 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.9■□□□□ 0.14
CNOT9Q92600 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms