Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHC3Q92529 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC3Q92529 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHC3Q92529 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
SHC3Q92529 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
SHC3Q92529 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SHC3Q92529 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC3Q92529 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.35■□□□□ 0.53
SHC3Q92529 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
SHC3Q92529 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC3Q92529 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.35■□□□□ 0.53
SHC3Q92529 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.35■□□□□ 0.53
SHC3Q92529 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.35■□□□□ 0.53
SHC3Q92529 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SHC3Q92529 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.35■□□□□ 0.53
SHC3Q92529 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.35■□□□□ 0.53
SHC3Q92529 IFNL4P1-201ENST00000607083 540 ntBASIC18.35■□□□□ 0.53
SHC3Q92529 AL139424.1-201ENST00000607572 797 ntBASIC18.35■□□□□ 0.53
SHC3Q92529 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.35■□□□□ 0.53
SHC3Q92529 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC3Q92529 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SHC3Q92529 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC3Q92529 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SHC3Q92529 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.34■□□□□ 0.53
SHC3Q92529 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SHC3Q92529 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.34■□□□□ 0.53
SHC3Q92529 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.34■□□□□ 0.53
SHC3Q92529 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 UNC93B7-201ENST00000509439 705 ntBASIC18.34■□□□□ 0.53
SHC3Q92529 MTDHP4-201ENST00000600287 670 ntBASIC18.34■□□□□ 0.53
SHC3Q92529 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.34■□□□□ 0.53
SHC3Q92529 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.34■□□□□ 0.53
SHC3Q92529 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC3Q92529 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
SHC3Q92529 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
SHC3Q92529 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC3Q92529 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.33■□□□□ 0.53
SHC3Q92529 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.33■□□□□ 0.53
SHC3Q92529 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 RNF216P1-203ENST00000404404 2427 ntBASIC18.33■□□□□ 0.53
SHC3Q92529 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SHC3Q92529 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
SHC3Q92529 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SHC3Q92529 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC3Q92529 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.33■□□□□ 0.52
SHC3Q92529 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHC3Q92529 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHC3Q92529 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.33■□□□□ 0.52
SHC3Q92529 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHC3Q92529 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SHC3Q92529 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.33■□□□□ 0.52
SHC3Q92529 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.33■□□□□ 0.52
SHC3Q92529 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.33■□□□□ 0.52
SHC3Q92529 LINC01711-201ENST00000598340 967 ntBASIC18.33■□□□□ 0.52
SHC3Q92529 AC025062.2-201ENST00000605477 670 ntBASIC18.33■□□□□ 0.52
SHC3Q92529 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHC3Q92529 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms