Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
U2AF1L4Q8WU68 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
U2AF1L4Q8WU68 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
U2AF1L4Q8WU68 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.71■□□□□ 0.75
U2AF1L4Q8WU68 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 SIRPAP1-201ENST00000448467 1770 ntBASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 DDX43P3-201ENST00000441064 443 ntBASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 GAPDHP21-201ENST00000450301 1010 ntBASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 AC068137.2-201ENST00000605408 478 ntBASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 GGTLC5P-201ENST00000617623 998 ntBASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.7■□□□□ 0.74
U2AF1L4Q8WU68 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 COX5BP2-201ENST00000392354 334 ntBASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 PTCHD3P3-201ENST00000403073 906 ntBASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.69■□□□□ 0.74
U2AF1L4Q8WU68 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 RN7SL204P-201ENST00000582831 262 ntBASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 AC009093.7-201ENST00000623853 1223 ntBASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
U2AF1L4Q8WU68 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms