Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 AL157888.1-201ENST00000631930 593 ntBASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD2Q8NHY2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.08■□□□□ 0.33
RFWD2Q8NHY2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 AC009947.2-201ENST00000444014 672 ntBASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD2Q8NHY2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 INGX-201ENST00000359239 846 ntBASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 AC112698.1-201ENST00000510299 916 ntBASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD2Q8NHY2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD2Q8NHY2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD2Q8NHY2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFWD2Q8NHY2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.06■□□□□ 0.32
RFWD2Q8NHY2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RFWD2Q8NHY2 AC105917.1-201ENST00000506637 2539 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms