Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 PMS2P7-201ENST00000506558 1336 ntBASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 AC096633.1-201ENST00000422446 749 ntBASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
FBXO39Q8N4B4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 AC016396.2-201ENST00000562575 1417 ntBASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 MIR7706-201ENST00000613747 67 ntBASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 AC022211.2-201ENST00000585075 2527 ntBASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
FBXO39Q8N4B4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 MIR1233-2-201ENST00000408138 82 ntBASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 MIR1233-1-201ENST00000408722 82 ntBASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 AP001269.4-201ENST00000609611 512 ntBASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FBXO39Q8N4B4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms