Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 FAM220CP-201ENST00000395253 831 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 SPDYE15P-201ENST00000424157 909 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 BX664615.1-201ENST00000443558 458 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 ATP5G1P1-201ENST00000448724 379 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 HOMER2P1-201ENST00000455653 964 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 GUSBP12-201ENST00000513727 720 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 AL441883.1-201ENST00000566170 1045 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 AC005332.3-201ENST00000589904 676 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 AC092053.1-201ENST00000605787 1936 ntBASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01561Q8N1V8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 SLC25A3P1-201ENST00000443844 931 ntBASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 AL359075.1-203ENST00000462729 1002 ntBASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01561Q8N1V8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms