Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 OR7E47P-204ENST00000575924 449 ntBASIC17.55■□□□□ 0.4
CHPFQ8IZ52 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHPFQ8IZ52 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 PDPK2P-202ENST00000562415 1191 ntBASIC17.54■□□□□ 0.4
CHPFQ8IZ52 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 REXO1L11P-201ENST00000620964 1927 ntBASIC17.54■□□□□ 0.4
CHPFQ8IZ52 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CHPFQ8IZ52 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 AL135999.2-201ENST00000622438 1686 ntBASIC17.53■□□□□ 0.4
CHPFQ8IZ52 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 MKNK2P1-201ENST00000437526 628 ntBASIC17.53■□□□□ 0.4
CHPFQ8IZ52 KRT19P2-202ENST00000557173 1012 ntBASIC17.53■□□□□ 0.4
CHPFQ8IZ52 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHPFQ8IZ52 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms