Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 AC117947.1-201ENST00000427448 529 ntBASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 KRT18P38-201ENST00000449496 1282 ntBASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 GUSBP12-201ENST00000513727 720 ntBASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 AL138831.2-201ENST00000606564 490 ntBASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 AL135999.2-201ENST00000622438 1686 ntBASIC18.54■□□□□ 0.56
CCDC170Q8IYT3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 GPR89P-201ENST00000407924 1495 ntBASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 FAM220CP-201ENST00000395253 831 ntBASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 AC113347.1-201ENST00000413321 391 ntBASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 TSPY5P-201ENST00000426936 936 ntBASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 AC112907.2-201ENST00000448639 330 ntBASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC170Q8IYT3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 AL353593.2-201ENST00000602529 1483 ntBASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 AL391005.1-201ENST00000623953 2435 ntBASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 CROCCP1-201ENST00000426910 5675 ntBASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 AL596275.1-201ENST00000423464 877 ntBASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 RN7SL606P-201ENST00000472779 293 ntBASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 AP002490.2-201ENST00000524791 560 ntBASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC170Q8IYT3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC170Q8IYT3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC170Q8IYT3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC170Q8IYT3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC170Q8IYT3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC170Q8IYT3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms