Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 AC092171.3-201ENST00000610122 2651 ntBASIC20.28■□□□□ 0.84
CCDC83Q8IWF9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 IGHV3-47-201ENST00000425060 335 ntBASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 MIR3180-1-201ENST00000580374 94 ntBASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 MIR3180-3-201ENST00000584616 94 ntBASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 AL590326.2-201ENST00000625139 305 ntBASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC83Q8IWF9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CCDC83Q8IWF9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CCDC83Q8IWF9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CCDC83Q8IWF9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.83
CCDC83Q8IWF9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC83Q8IWF9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC83Q8IWF9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC83Q8IWF9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 AC124947.2-201ENST00000547118 1133 ntBASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC83Q8IWF9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 AC148477.5-201ENST00000625164 1645 ntBASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 AC074051.2-201ENST00000565115 352 ntBASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms