Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC60Q8IWA6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC60Q8IWA6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC60Q8IWA6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCDC60Q8IWA6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC60Q8IWA6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 AC023141.13-201ENST00000604991 943 ntBASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 AL078644.1-201ENST00000609881 752 ntBASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC60Q8IWA6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 AC129492.6-201ENST00000611383 1305 ntBASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 REXO1L3P-201ENST00000622202 1288 ntBASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 AC007064.4-201ENST00000637740 555 ntBASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC60Q8IWA6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 AC134684.3-201ENST00000641758 218 ntBASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC60Q8IWA6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC60Q8IWA6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms