Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 AC096633.1-201ENST00000422446 749 ntBASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 AC125634.1-201ENST00000438758 1403 ntBASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 AC097374.2-201ENST00000618617 1306 ntBASIC16.45■□□□□ 0.22
SLC44A2Q8IWA5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 ATP5G2P1-201ENST00000433580 426 ntBASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 AP000867.3-201ENST00000524675 377 ntBASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 MIR3180-1-201ENST00000580374 94 ntBASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 AP005901.3-202ENST00000581653 237 ntBASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 MIR3180-3-201ENST00000584616 94 ntBASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 AC092329.2-201ENST00000598402 547 ntBASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A2Q8IWA5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms