Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 AL358472.4-201ENST00000633140 710 ntBASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 KLF4P1-201ENST00000412782 1185 ntBASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 KRT18P35-201ENST00000510488 1269 ntBASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 AP000867.3-201ENST00000524675 377 ntBASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 BNIP3P18-201ENST00000593976 575 ntBASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 AP000550.4-202ENST00000639755 178 ntBASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 AC132938.5-201ENST00000624980 1813 ntBASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 AC009336.1-201ENST00000608941 1553 ntBASIC15.28■□□□□ 0.04
LINC00346Q8IVM7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 AC079328.2-201ENST00000561241 3354 ntBASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 AC073592.5-201ENST00000624854 528 ntBASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
LINC00346Q8IVM7 AL135999.2-201ENST00000622438 1686 ntBASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LINC00346Q8IVM7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms