Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 PMS2P4-201ENST00000412466 1052 ntBASIC18.28■□□□□ 0.52
RNF135Q8IUD6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 AC074386.1-202ENST00000463561 864 ntBASIC18.28■□□□□ 0.52
RNF135Q8IUD6 AC096734.2-201ENST00000562054 433 ntBASIC18.28■□□□□ 0.52
RNF135Q8IUD6 AC105339.1-204ENST00000636249 355 ntBASIC18.28■□□□□ 0.52
RNF135Q8IUD6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF135Q8IUD6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 AC122714.2-201ENST00000502787 707 ntBASIC18.27■□□□□ 0.52
RNF135Q8IUD6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 AC093520.2-201ENST00000561830 333 ntBASIC18.27■□□□□ 0.52
RNF135Q8IUD6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 AC010654.1-201ENST00000615722 808 ntBASIC18.27■□□□□ 0.52
RNF135Q8IUD6 AC091812.2-201ENST00000619081 385 ntBASIC18.27■□□□□ 0.52
RNF135Q8IUD6 LINC00628-201ENST00000628516 1289 ntBASIC18.27■□□□□ 0.52
RNF135Q8IUD6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF135Q8IUD6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF135Q8IUD6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 AC005225.4-201ENST00000557330 545 ntBASIC18.26■□□□□ 0.51
RNF135Q8IUD6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 AL390955.2-201ENST00000603032 514 ntBASIC18.26■□□□□ 0.51
RNF135Q8IUD6 AC073592.5-201ENST00000624854 528 ntBASIC18.26■□□□□ 0.51
RNF135Q8IUD6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
RNF135Q8IUD6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF135Q8IUD6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms