Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 BX842568.4-201ENST00000421222 227 ntBASIC16.52■□□□□ 0.24
RAB43Q86YS6 MED15P5-201ENST00000423150 992 ntBASIC16.52■□□□□ 0.24
RAB43Q86YS6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 AC006557.2-201ENST00000592985 1240 ntBASIC16.52■□□□□ 0.24
RAB43Q86YS6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 Z83851.2-201ENST00000609564 659 ntBASIC16.52■□□□□ 0.24
RAB43Q86YS6 FAM197Y3-203ENST00000618346 717 ntBASIC16.52■□□□□ 0.24
RAB43Q86YS6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RAB43Q86YS6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB43Q86YS6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB43Q86YS6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAB43Q86YS6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB43Q86YS6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.52■□□□□ 0.23
RAB43Q86YS6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.52■□□□□ 0.23
RAB43Q86YS6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.52■□□□□ 0.23
RAB43Q86YS6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB43Q86YS6 AC008894.3-201ENST00000624324 3103 ntBASIC16.52■□□□□ 0.23
RAB43Q86YS6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RAB43Q86YS6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 AL645608.8-201ENST00000606034 2086 ntBASIC16.51■□□□□ 0.23
RAB43Q86YS6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 COX5BP2-201ENST00000392354 334 ntBASIC16.51■□□□□ 0.23
RAB43Q86YS6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 MIR1233-2-201ENST00000408138 82 ntBASIC16.51■□□□□ 0.23
RAB43Q86YS6 MIR1233-1-201ENST00000408722 82 ntBASIC16.51■□□□□ 0.23
RAB43Q86YS6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 AC012640.2-201ENST00000561606 901 ntBASIC16.51■□□□□ 0.23
RAB43Q86YS6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 AD001527.2-201ENST00000622994 785 ntBASIC16.51■□□□□ 0.23
RAB43Q86YS6 PGM5P2-202ENST00000637225 1043 ntBASIC16.51■□□□□ 0.23
RAB43Q86YS6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB43Q86YS6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB43Q86YS6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB43Q86YS6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAB43Q86YS6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB43Q86YS6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB43Q86YS6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 AC018695.7-201ENST00000624587 2492 ntBASIC16.5■□□□□ 0.23
RAB43Q86YS6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB43Q86YS6 RNA5SP415-201ENST00000517246 115 ntBASIC16.5■□□□□ 0.23
RAB43Q86YS6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB43Q86YS6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms