Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 AC113347.1-201ENST00000413321 391 ntBASIC15.63■□□□□ 0.09
SHFQ7M4L6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHFQ7M4L6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.63■□□□□ 0.09
SHFQ7M4L6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 AL353692.3-201ENST00000407031 1396 ntBASIC15.62■□□□□ 0.09
SHFQ7M4L6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 MIR662-201ENST00000384847 95 ntBASIC15.62■□□□□ 0.09
SHFQ7M4L6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 HOMER2P1-201ENST00000455653 964 ntBASIC15.62■□□□□ 0.09
SHFQ7M4L6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 YBX1P2-201ENST00000489612 999 ntBASIC15.62■□□□□ 0.09
SHFQ7M4L6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 GPR32P1-201ENST00000601788 811 ntBASIC15.62■□□□□ 0.09
SHFQ7M4L6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 AL162727.3-201ENST00000635661 2787 ntBASIC15.62■□□□□ 0.09
SHFQ7M4L6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.62■□□□□ 0.09
SHFQ7M4L6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHFQ7M4L6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.61■□□□□ 0.09
SHFQ7M4L6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHFQ7M4L6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms