Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 MRPL20P1-201ENST00000400819 433 ntBASIC20.43■□□□□ 0.86
CTR9Q6PD62 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 IGLL3P-201ENST00000412472 434 ntBASIC20.43■□□□□ 0.86
CTR9Q6PD62 RNA5SP416-201ENST00000516838 111 ntBASIC20.43■□□□□ 0.86
CTR9Q6PD62 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 AC016396.2-201ENST00000562575 1417 ntBASIC20.43■□□□□ 0.86
CTR9Q6PD62 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTR9Q6PD62 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.43■□□□□ 0.86
CTR9Q6PD62 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 AC010654.1-201ENST00000615722 808 ntBASIC20.42■□□□□ 0.86
CTR9Q6PD62 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.42■□□□□ 0.86
CTR9Q6PD62 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTR9Q6PD62 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 PP12613-201ENST00000424958 2230 ntBASIC20.41■□□□□ 0.86
CTR9Q6PD62 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CTR9Q6PD62 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTR9Q6PD62 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.4■□□□□ 0.86
CTR9Q6PD62 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CTR9Q6PD62 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.4■□□□□ 0.86
CTR9Q6PD62 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms