Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 FAM220CP-201ENST00000395253 831 ntBASIC17.62■□□□□ 0.41
CASC4Q6P4E1 AL845331.1-201ENST00000424978 1190 ntBASIC17.62■□□□□ 0.41
CASC4Q6P4E1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 BX276092.5-203ENST00000456199 560 ntBASIC17.62■□□□□ 0.41
CASC4Q6P4E1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 AC103564.2-201ENST00000432853 1299 ntBASIC17.61■□□□□ 0.41
CASC4Q6P4E1 AC122714.2-201ENST00000502787 707 ntBASIC17.61■□□□□ 0.41
CASC4Q6P4E1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 AL121672.3-201ENST00000608644 468 ntBASIC17.61■□□□□ 0.41
CASC4Q6P4E1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 LINC02012-201ENST00000608206 1725 ntBASIC17.61■□□□□ 0.41
CASC4Q6P4E1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CASC4Q6P4E1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 AC124067.4-201ENST00000519691 2379 ntBASIC17.6■□□□□ 0.41
CASC4Q6P4E1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 AL049597.2-201ENST00000565575 961 ntBASIC17.6■□□□□ 0.41
CASC4Q6P4E1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 AL353801.3-201ENST00000609898 542 ntBASIC17.6■□□□□ 0.41
CASC4Q6P4E1 AL121956.5-201ENST00000625261 221 ntBASIC17.6■□□□□ 0.41
CASC4Q6P4E1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms